dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00375
Location and strand information: 40455 - 43721 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00376
Location and strand information: 43761 - 45320 (+)
Family: 8.A.46.1.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00377
Location and strand information: 45356 - 47074 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00378
Location and strand information: 47080 - 48822 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00379
Location and strand information: 48839 - 51991 (+)
Family: 1.B.14.6.2
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00380
Location and strand information: 51997 - 53748 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00381
Location and strand information: 53781 - 55388 (+)
Family: PL9_1|PL9
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3437
Protein molecular weight: 58178.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00382
Location and strand information: 55410 - 56063 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00383
Location and strand information: 55920 - 56207 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00384
Location and strand information: 56316 - 59612 (+)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4833
Protein molecular weight: 125339.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00385
Location and strand information: 59691 - 61235 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.6062
Protein molecular weight: 57130.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00386
Location and strand information: 61346 - 62485 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5053
Protein molecular weight: 43571.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00387
Location and strand information: 62752 - 64593 (+)
Family: PL11|CBM2|CBM35|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan exolyase YesX
Protein isoelectric point: 5.9352
Protein molecular weight: 68365.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00388
Location and strand information: 64597 - 65994 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.138
Protein molecular weight: 52499.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00389
Location and strand information: 66025 - 66339 (+)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00390
Location and strand information: 66482 - 70783 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00391
Location and strand information: 70940 - 72718 (+)
Family: CE0|CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.8933
Protein molecular weight: 67780.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00392
Location and strand information: 72766 - 73569 (+)
Family: CE6
Protein type: CAZyme
Protein description: Carbohydrate acetyl esterase/feruloyl esterase
Protein isoelectric point: 9.3928
Protein molecular weight: 29856.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00393
Location and strand information: 74222 - 77191 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.4167
Protein molecular weight: 112833.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00394
Location and strand information: 77279 - 81574 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00395
Location and strand information: 81919 - 83232 (+)
Family: PL9_1|PL9
Protein type: CAZyme
Protein description: Pectate lyase L
Protein isoelectric point: 7.4792
Protein molecular weight: 48564.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00396
Location and strand information: 83345 - 83995 (-)
Family: null
Protein type: null
Protein description: Phosphoglycolate phosphatase

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00397
Location and strand information: 84069 - 85745 (-)
Family: GH43_10|GH43
Protein type: CAZyme
Protein description: Xylan 1,3-beta-xylosidase
Protein isoelectric point: 7.0478
Protein molecular weight: 62677.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00398
Location and strand information: 85910 - 87142 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC1
Gene ID: MGYG000000196_00399
Location and strand information: 87294 - 88901 (-)
Family: GH28
Protein type: CAZyme
Protein description: Exo-poly-alpha-D-galacturonosidase
Protein isoelectric point: 4.9031
Protein molecular weight: 59152.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000196_00381	PL9_e26\|4.2.2.23	pectin
MGYG000000196_00384	PL26_e0
MGYG000000196_00385	CE12_e40
MGYG000000196_00386	GH105_e14\|3.2.1.172	pectin
MGYG000000196_00387	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000000196_00388	GH105_e35\|3.2.1.172	pectin
MGYG000000196_00391	CE4_e36
MGYG000000196_00392	CE6_e5
MGYG000000196_00393	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000000196_00395	PL9_e26\|4.2.2.23	pectin
MGYG000000196_00397	GH43_e184\|3.2.1.55	xylan
MGYG000000196_00399	GH28_e61

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000196_00375	TonB-dependent receptor SusC	TC	40455	43721	+	1.B.14.6.1
MGYG000000196_00376	hypothetical protein	TC	43761	45320	+	8.A.46.1.4
MGYG000000196_00377	hypothetical protein	null	45356	47074	+	Fasciclin\| DUF5108
MGYG000000196_00378	hypothetical protein	null	47080	48822	+	No domain
MGYG000000196_00379	TonB-dependent receptor SusC	TC	48839	51991	+	1.B.14.6.2
MGYG000000196_00380	hypothetical protein	null	51997	53748	+	No domain
MGYG000000196_00381	hypothetical protein	CAZyme	53781	55388	+	PL9_1\| PL9
MGYG000000196_00382	hypothetical protein	null	55410	56063	+	No domain
MGYG000000196_00383	hypothetical protein	null	55920	56207	-	No domain
MGYG000000196_00384	hypothetical protein	CAZyme	56316	59612	+	PL26
MGYG000000196_00385	hypothetical protein	CAZyme	59691	61235	-	CE12
MGYG000000196_00386	hypothetical protein	CAZyme	61346	62485	-	GH105
MGYG000000196_00387	Rhamnogalacturonan exolyase YesX	CAZyme	62752	64593	+	PL11\| CBM2\| CBM35\| PL11_1
MGYG000000196_00388	hypothetical protein	CAZyme	64597	65994	+	GH105
MGYG000000196_00389	L-rhamnose mutarotase	null	66025	66339	+	rhaM
MGYG000000196_00390	Sensor histidine kinase RcsC	TF	66482	70783	+	HTH_AraC+HTH_AraC
MGYG000000196_00391	hypothetical protein	CAZyme	70940	72718	+	CE0\| CE4
MGYG000000196_00392	Carbohydrate acetyl esterase/feruloyl esterase	CAZyme	72766	73569	+	CE6
MGYG000000196_00393	Beta-galactosidase	CAZyme	74222	77191	-	GH2
MGYG000000196_00394	Sensor histidine kinase RcsC	TF	77279	81574	-	HTH_AraC
MGYG000000196_00395	Pectate lyase L	CAZyme	81919	83232	+	PL9_1\| PL9
MGYG000000196_00396	Phosphoglycolate phosphatase	null	83345	83995	-	HAD_2
MGYG000000196_00397	Xylan 1,3-beta-xylosidase	CAZyme	84069	85745	-	GH43_10\| GH43
MGYG000000196_00398	hypothetical protein	null	85910	87142	-	DUF4861
MGYG000000196_00399	Exo-poly-alpha-D-galacturonosidase	CAZyme	87294	88901	-	GH28
Protein ID	Protein Name	Type	Start	End	Strand	Signature