dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00823
Location and strand information: 32147 - 33232 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1151
Protein molecular weight: 42437.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00824
Location and strand information: 33252 - 34472 (-)
Family: GT4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2058
Protein molecular weight: 46261.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00825
Location and strand information: 34490 - 35188 (-)
Family: 9.B.18.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00826
Location and strand information: 35260 - 36465 (-)
Family: null
Protein type: null
Protein description: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00827
Location and strand information: 36483 - 38483 (-)
Family: 9.B.18.2.1
Protein type: TC
Protein description: UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00828
Location and strand information: 38526 - 40358 (-)
Family: null
Protein type: null
Protein description: Transcriptional regulator LytR

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00829
Location and strand information: 40574 - 42730 (-)
Family: 2.A.6.4.2
Protein type: TC
Protein description: Protein translocase subunit SecDF

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00830
Location and strand information: 42759 - 43184 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00831
Location and strand information: 43381 - 43866 (+)
Family: 2.A.115.2.14
Protein type: TC
Protein description: Cytidylate kinase

Gene clsuter ID: MGYG000000176_3|CGC1
Gene ID: MGYG000000176_00832
Location and strand information: 43875 - 45146 (-)
Family: 2.A.23.1.5
Protein type: TC
Protein description: Proton/glutamate-aspartate symporter

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000176_00823	hypothetical protein	CAZyme	32147	33232	-	GT2
MGYG000000176_00824	hypothetical protein	CAZyme	33252	34472	-	GT4
MGYG000000176_00825	hypothetical protein	TC	34490	35188	-	9.B.18.1.3
MGYG000000176_00826	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	null	35260	36465	-	DegT_DnrJ_EryC1
MGYG000000176_00827	UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase	TC	36483	38483	-	9.B.18.2.1
MGYG000000176_00828	Transcriptional regulator LytR	null	38526	40358	-	LytR_cpsA_psr
MGYG000000176_00829	Protein translocase subunit SecDF	TC	40574	42730	-	2.A.6.4.2
MGYG000000176_00830	hypothetical protein	null	42759	43184	-	No domain
MGYG000000176_00831	Cytidylate kinase	TC	43381	43866	+	2.A.115.2.14
MGYG000000176_00832	Proton/glutamate-aspartate symporter	TC	43875	45146	-	2.A.23.1.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature