dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01978
Location and strand information: 60067 - 62262 (+)
Family: 3.2.1.22|GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 5.3635
Protein molecular weight: 83923.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01979
Location and strand information: 62369 - 63349 (-)
Family: 3.A.1.2.21
Protein type: TC
Protein description: D-galactose-binding periplasmic protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01980
Location and strand information: 63346 - 65370 (-)
Family: 1.B.52.2.1
Protein type: TC
Protein description: Methyl-accepting chemotaxis protein McpB

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01981
Location and strand information: 65633 - 66670 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01982
Location and strand information: 66783 - 69248 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.0123
Protein molecular weight: 95414.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01983
Location and strand information: 69265 - 71397 (+)
Family: GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8772
Protein molecular weight: 82158.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01984
Location and strand information: 71413 - 72318 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01985
Location and strand information: 72694 - 74142 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01986
Location and strand information: 74558 - 75544 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01987
Location and strand information: 75560 - 76420 (+)
Family: 3.A.1.1.18
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01988
Location and strand information: 76439 - 77614 (+)
Family: null
Protein type: null
Protein description: Cellobiose 2-epimerase

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01989
Location and strand information: 77604 - 78779 (+)
Family: 2.4.1.281|GH130
Protein type: CAZyme
Protein description: 4-O-beta-D-mannosyl-D-glucose phosphorylase
Protein isoelectric point: 5.3361
Protein molecular weight: 44216.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01990
Location and strand information: 78816 - 79838 (+)
Family: GH130
Protein type: CAZyme
Protein description: Beta-1,4-mannooligosaccharide phosphorylase
Protein isoelectric point: 4.91
Protein molecular weight: 38644.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01991
Location and strand information: 79970 - 81100 (+)
Family: CBM35inCE17|CE17
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7798
Protein molecular weight: 42465.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01992
Location and strand information: 81158 - 83356 (+)
Family: dCache_1+MCPsignal
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01993
Location and strand information: 83381 - 85684 (+)
Family: GH1
Protein type: CAZyme
Protein description: 6-phospho-beta-galactosidase
Protein isoelectric point: 5.0181
Protein molecular weight: 88021.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01994
Location and strand information: 85715 - 87217 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01995
Location and strand information: 87462 - 88631 (+)
Family: 2.A.4.7.3
Protein type: TC
Protein description: Ferrous-iron efflux pump FieF

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01996
Location and strand information: 88781 - 90568 (+)
Family: dCache_2+MCPsignal
Protein type: STP
Protein description: Methyl-accepting chemotaxis protein 4

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01997
Location and strand information: 90766 - 91380 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01998
Location and strand information: 91504 - 93114 (+)
Family: 9.B.34.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_01999
Location and strand information: 93159 - 95267 (-)
Family: MCPsignal
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02000
Location and strand information: 95292 - 96182 (-)
Family: null
Protein type: null
Protein description: Carboxylesterase NlhH

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02001
Location and strand information: 96359 - 97708 (+)
Family: 2.A.66.1.28
Protein type: TC
Protein description: Multidrug resistance protein MdtK

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02002
Location and strand information: 97705 - 98994 (+)
Family: 2.A.66.1.37
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02003
Location and strand information: 99383 - 100756 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02004
Location and strand information: 100896 - 101774 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: Trehalose transport system permease protein SugA

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02005
Location and strand information: 101774 - 102637 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02006
Location and strand information: 102671 - 104128 (+)
Family: GH13|GH13_18
Protein type: CAZyme
Protein description: Sucrose phosphorylase
Protein isoelectric point: 4.8495
Protein molecular weight: 56296.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02007
Location and strand information: 104082 - 105500 (+)
Family: GH32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5749
Protein molecular weight: 54264.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02008
Location and strand information: 105526 - 106518 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator DegA

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02009
Location and strand information: 106543 - 107526 (+)
Family: PfkB
Protein type: STP
Protein description: Fructokinase

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02010
Location and strand information: 107546 - 108880 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000153_9|CGC3
Gene ID: MGYG000000153_02011
Location and strand information: 108885 - 110555 (+)
Family: 1.B.52.2.1
Protein type: TC
Protein description: Chromosome partition protein Smc

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000153_01978	GH36_e25\|3.2.1.22	alpha-galactan
MGYG000000153_01982	GH2_e108
MGYG000000153_01983	GH36_e27
MGYG000000153_01989	GH130_e11\|2.4.1.281	beta-mannan
MGYG000000153_01990	GH130_e1\|2.4.1.320\|2.4.1.319\|2.4.1.-	beta-mannan
MGYG000000153_01991
MGYG000000153_01993
MGYG000000153_02006	GH13_e107\|2.4.1.7\|2.4.1.-	sucrose
MGYG000000153_02007	GH32_e43\|3.2.1.65\|3.2.1.26	fructan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-mannan

Substrate predicted by dbCAN-PUL is beta-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000153_01978	Alpha-galactosidase AgaA	CAZyme	60067	62262	+	3.2.1.22\| GH36
MGYG000000153_01979	D-galactose-binding periplasmic protein	TC	62369	63349	-	3.A.1.2.21
MGYG000000153_01980	Methyl-accepting chemotaxis protein McpB	TC	63346	65370	-	1.B.52.2.1
MGYG000000153_01981	HTH-type transcriptional repressor CytR	TF	65633	66670	+	LacI
MGYG000000153_01982	Beta-galactosidase	CAZyme	66783	69248	+	GH2
MGYG000000153_01983	hypothetical protein	CAZyme	69265	71397	+	GH36
MGYG000000153_01984	HTH-type transcriptional activator RhaR	TF	71413	72318	-	HTH_AraC+HTH_AraC
MGYG000000153_01985	hypothetical protein	STP	72694	74142	+	SBP_bac_1
MGYG000000153_01986	hypothetical protein	TC	74558	75544	+	3.A.1.1.34
MGYG000000153_01987	L-arabinose transport system permease protein AraQ	TC	75560	76420	+	3.A.1.1.18
MGYG000000153_01988	Cellobiose 2-epimerase	null	76439	77614	+	GlcNAc_2-epim
MGYG000000153_01989	4-O-beta-D-mannosyl-D-glucose phosphorylase	CAZyme	77604	78779	+	2.4.1.281\| GH130
MGYG000000153_01990	Beta-1,4-mannooligosaccharide phosphorylase	CAZyme	78816	79838	+	GH130
MGYG000000153_01991	hypothetical protein	CAZyme	79970	81100	+	CBM35inCE17\| CE17
MGYG000000153_01992	hypothetical protein	STP	81158	83356	+	dCache_1\| MCPsignal
MGYG000000153_01993	6-phospho-beta-galactosidase	CAZyme	83381	85684	+	GH1
MGYG000000153_01994	hypothetical protein	null	85715	87217	-	PG_binding_4\| PG_binding_4\| YkuD
MGYG000000153_01995	Ferrous-iron efflux pump FieF	TC	87462	88631	+	2.A.4.7.3
MGYG000000153_01996	Methyl-accepting chemotaxis protein 4	STP	88781	90568	+	dCache_2\| MCPsignal
MGYG000000153_01997	hypothetical protein	null	90766	91380	+	Hydrolase_2
MGYG000000153_01998	hypothetical protein	TC	91504	93114	+	9.B.34.1.2
MGYG000000153_01999	hypothetical protein	STP	93159	95267	-	MCPsignal
MGYG000000153_02000	Carboxylesterase NlhH	null	95292	96182	-	Abhydrolase_3
MGYG000000153_02001	Multidrug resistance protein MdtK	TC	96359	97708	+	2.A.66.1.28
MGYG000000153_02002	Multidrug export protein MepA	TC	97705	98994	+	2.A.66.1.37
MGYG000000153_02003	hypothetical protein	TC	99383	100756	+	3.A.1.1.45
MGYG000000153_02004	Trehalose transport system permease protein SugA	TC	100896	101774	+	3.A.1.1.45
MGYG000000153_02005	L-arabinose transport system permease protein AraQ	TC	101774	102637	+	3.A.1.1.45
MGYG000000153_02006	Sucrose phosphorylase	CAZyme	102671	104128	+	GH13\| GH13_18
MGYG000000153_02007	hypothetical protein	CAZyme	104082	105500	+	GH32
MGYG000000153_02008	HTH-type transcriptional regulator DegA	TF	105526	106518	+	LacI
MGYG000000153_02009	Fructokinase	STP	106543	107526	+	PfkB
MGYG000000153_02010	hypothetical protein	TC	107546	108880	+	3.A.1.1.45
MGYG000000153_02011	Chromosome partition protein Smc	TC	108885	110555	+	1.B.52.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature