dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02202
Location and strand information: 389 - 2320 (+)
Family: 3.A.18.1.1
Protein type: TC
Protein description: ATP-dependent RNA helicase DeaD

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02203
Location and strand information: 2393 - 6463 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02204
Location and strand information: 6808 - 9945 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02205
Location and strand information: 9958 - 11577 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02206
Location and strand information: 11602 - 13416 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02207
Location and strand information: 13425 - 14564 (+)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.679
Protein molecular weight: 43707.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02208
Location and strand information: 14573 - 15751 (+)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3584
Protein molecular weight: 45087.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02209
Location and strand information: 15788 - 17257 (+)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2522
Protein molecular weight: 55859.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02210
Location and strand information: 17411 - 19552 (-)
Family: null
Protein type: null
Protein description: Dipeptidyl-peptidase 7

Gene clsuter ID: MGYG000000054_24|CGC1
Gene ID: MGYG000000054_02211
Location and strand information: 19583 - 20938 (-)
Family: 9.B.145.1.2
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000054_02207	GH76_e32
MGYG000000054_02208	GH76_e1\|3.2.1.101	alpha-mannan
MGYG000000054_02209	GH125_e1\|3.2.1.-	alpha-mannan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-mannan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000054_02202	ATP-dependent RNA helicase DeaD	TC	389	2320	+	3.A.18.1.1
MGYG000000054_02203	Sensor histidine kinase RcsC	TF	2393	6463	-	HTH_AraC+HTH_AraC
MGYG000000054_02204	TonB-dependent receptor SusC	TC	6808	9945	+	1.B.14.6.1
MGYG000000054_02205	SusD-like protein	null	9958	11577	+	SusD-like_3\| SusD_RagB
MGYG000000054_02206	hypothetical protein	null	11602	13416	+	SusE
MGYG000000054_02207	hypothetical protein	CAZyme	13425	14564	+	GH76
MGYG000000054_02208	hypothetical protein	CAZyme	14573	15751	+	GH76
MGYG000000054_02209	hypothetical protein	CAZyme	15788	17257	+	GH125
MGYG000000054_02210	Dipeptidyl-peptidase 7	null	17411	19552	-	Peptidase_S46
MGYG000000054_02211	hypothetical protein	TC	19583	20938	-	9.B.145.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature