dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00783
Location and strand information: 237058 - 238629 (-)
Family: PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4506
Protein molecular weight: 57853.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00784
Location and strand information: 238888 - 242145 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00785
Location and strand information: 242170 - 244131 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00786
Location and strand information: 244152 - 246044 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00787
Location and strand information: 246062 - 247735 (+)
Family: CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6199
Protein molecular weight: 62535.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00788
Location and strand information: 247759 - 249366 (+)
Family: PL1|PL1_2|CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6164
Protein molecular weight: 58482.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00789
Location and strand information: 249377 - 250855 (+)
Family: PL1|PL1_2|CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7135
Protein molecular weight: 53719.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00790
Location and strand information: 250983 - 255554 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00791
Location and strand information: 255645 - 257387 (-)
Family: CE4|CE8|CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.0777
Protein molecular weight: 64869.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00792
Location and strand information: 257789 - 259891 (-)
Family: CE8|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6228
Protein molecular weight: 80045.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00793
Location and strand information: 260191 - 261591 (+)
Family: 4.A.5.1.4
Protein type: TC
Protein description: PTS system galactitol-specific EIIC component

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00794
Location and strand information: 261629 - 262549 (+)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00795
Location and strand information: 262842 - 264290 (+)
Family: 2.A.1.14.25
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00796
Location and strand information: 264687 - 268094 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC5
Gene ID: MGYG000000029_00797
Location and strand information: 268069 - 268893 (-)
Family: 2.A.64.1.2
Protein type: TC
Protein description: Sec-independent protein translocase protein TatCy

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000029_00783
MGYG000000029_00787	CE8_e49
MGYG000000029_00788	PL1_e44\|CE8_e45\|4.2.2.2	pectin
MGYG000000029_00789	PL1_e44\|CE8_e45\|4.2.2.2	pectin
MGYG000000029_00791	CE8_e6\|CE4_e36\|CE12_e9
MGYG000000029_00792	CE8_e34

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000029_00783	hypothetical protein	CAZyme	237058	238629	-	PL1_2
MGYG000000029_00784	hypothetical protein	TC	238888	242145	+	1.B.14.6.1
MGYG000000029_00785	hypothetical protein	null	242170	244131	+	SusD-like_3\| SusD_RagB
MGYG000000029_00786	hypothetical protein	null	244152	246044	+	DUF4957\| DUF5123
MGYG000000029_00787	hypothetical protein	CAZyme	246062	247735	+	CE8
MGYG000000029_00788	hypothetical protein	CAZyme	247759	249366	+	PL1\| PL1_2\| CE8
MGYG000000029_00789	hypothetical protein	CAZyme	249377	250855	+	PL1\| PL1_2\| CE8
MGYG000000029_00790	Sensor histidine kinase RcsC	TF	250983	255554	-	HTH_AraC
MGYG000000029_00791	hypothetical protein	CAZyme	255645	257387	-	CE4\| CE8\| CE12
MGYG000000029_00792	hypothetical protein	CAZyme	257789	259891	-	CE8\| GH105
MGYG000000029_00793	PTS system galactitol-specific EIIC component	TC	260191	261591	+	4.A.5.1.4
MGYG000000029_00794	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	261629	262549	+	KduI
MGYG000000029_00795	Hexuronate transporter	TC	262842	264290	+	2.A.1.14.25
MGYG000000029_00796	hypothetical protein	null	264687	268094	-	AAA_11\| AAA_11\| AAA_12
MGYG000000029_00797	Sec-independent protein translocase protein TatCy	TC	268069	268893	-	2.A.64.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature