dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00385
Location and strand information: 7012 - 8112 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptF

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00386
Location and strand information: 8112 - 9194 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptG

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00387
Location and strand information: 9332 - 11665 (+)
Family: PAS+HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Aerobic respiration control sensor protein ArcB

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00388
Location and strand information: 11898 - 12551 (+)
Family: null
Protein type: null
Protein description: Glyoxalase ElbB

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00389
Location and strand information: 12548 - 13273 (+)
Family: GT51
Protein type: CAZyme
Protein description: Biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 10.5377
Protein molecular weight: 26891.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00390
Location and strand information: 13313 - 13585 (-)
Family: 8.A.8.1.5
Protein type: TC
Protein description: Phosphocarrier protein NPr

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00391
Location and strand information: 13582 - 14436 (-)
Family: null
Protein type: null
Protein description: RNase adapter protein RapZ

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00392
Location and strand information: 14482 - 14973 (-)
Family: 4.A.2.1.4
Protein type: TC
Protein description: Nitrogen regulatory protein

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00393
Location and strand information: 15056 - 15343 (-)
Family: null
Protein type: null
Protein description: Ribosome hibernation promoting factor

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00394
Location and strand information: 15366 - 16799 (-)
Family: null
Protein type: null
Protein description: RNA polymerase sigma-54 factor

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00395
Location and strand information: 16847 - 17572 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00396
Location and strand information: 17579 - 18133 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptA

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00397
Location and strand information: 18102 - 18677 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptC

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00398
Location and strand information: 18674 - 19240 (-)
Family: null
Protein type: null
Protein description: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00399
Location and strand information: 19255 - 20241 (-)
Family: SIS+CBS+CBS
Protein type: STP
Protein description: Arabinose 5-phosphate isomerase KdsD

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00400
Location and strand information: 20255 - 21232 (-)
Family: 2.A.19.5.1
Protein type: TC
Protein description: Inner membrane protein YrbG

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00401
Location and strand information: 21460 - 22272 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid import ATP-binding protein MlaF

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00402
Location and strand information: 22280 - 23062 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00403
Location and strand information: 23067 - 23615 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaD

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00404
Location and strand information: 23631 - 24266 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid-binding protein MlaC

Gene clsuter ID: MGYG000000019_2|CGC1
Gene ID: MGYG000000019_00405
Location and strand information: 24266 - 24559 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaB

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000019_00385	Lipopolysaccharide export system permease protein LptF	TC	7012	8112	+	1.B.42.1.2
MGYG000000019_00386	Lipopolysaccharide export system permease protein LptG	TC	8112	9194	+	1.B.42.1.2
MGYG000000019_00387	Aerobic respiration control sensor protein ArcB	STP	9332	11665	+	PAS\| HisKA\| HATPase_c\| Response_reg
MGYG000000019_00388	Glyoxalase ElbB	null	11898	12551	+	No domain
MGYG000000019_00389	Biosynthetic peptidoglycan transglycosylase	CAZyme	12548	13273	+	GT51
MGYG000000019_00390	Phosphocarrier protein NPr	TC	13313	13585	-	8.A.8.1.5
MGYG000000019_00391	RNase adapter protein RapZ	null	13582	14436	-	ATP_bind_2
MGYG000000019_00392	Nitrogen regulatory protein	TC	14482	14973	-	4.A.2.1.4
MGYG000000019_00393	Ribosome hibernation promoting factor	null	15056	15343	-	Ribosomal_S30AE
MGYG000000019_00394	RNA polymerase sigma-54 factor	null	15366	16799	-	Sigma54_AID\| Sigma54_CBD\| Sigma54_DBD
MGYG000000019_00395	Lipopolysaccharide export system ATP-binding protein LptB	TC	16847	17572	-	1.B.42.1.2
MGYG000000019_00396	Lipopolysaccharide export system protein LptA	TC	17579	18133	-	1.B.42.1.2
MGYG000000019_00397	Lipopolysaccharide export system protein LptC	TC	18102	18677	-	1.B.42.1.2
MGYG000000019_00398	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	null	18674	19240	-	Hydrolase_3
MGYG000000019_00399	Arabinose 5-phosphate isomerase KdsD	STP	19255	20241	-	SIS\| CBS\| CBS
MGYG000000019_00400	Inner membrane protein YrbG	TC	20255	21232	-	2.A.19.5.1
MGYG000000019_00401	putative phospholipid import ATP-binding protein MlaF	TC	21460	22272	+	3.A.1.27.3
MGYG000000019_00402	putative phospholipid ABC transporter permease protein MlaE	TC	22280	23062	+	3.A.1.27.3
MGYG000000019_00403	putative phospholipid ABC transporter-binding protein MlaD	TC	23067	23615	+	3.A.1.27.3
MGYG000000019_00404	putative phospholipid-binding protein MlaC	TC	23631	24266	+	3.A.1.27.3
MGYG000000019_00405	putative phospholipid ABC transporter-binding protein MlaB	TC	24266	24559	+	3.A.1.27.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature