dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01562
Location and strand information: 29512 - 30213 (-)
Family: 3.A.1.24.6
Protein type: TC
Protein description: Methionine import system permease protein MetP

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01563
Location and strand information: 30206 - 31264 (-)
Family: 3.A.1.24.3
Protein type: TC
Protein description: Methionine import ATP-binding protein MetN 2

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01564
Location and strand information: 31277 - 32131 (-)
Family: 3.A.1.24.3
Protein type: TC
Protein description: putative D-methionine-binding lipoprotein MetQ

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01565
Location and strand information: 32480 - 34882 (-)
Family: 3.A.3.23.2
Protein type: TC
Protein description: putative cation-transporting ATPase E

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01566
Location and strand information: 34966 - 35472 (-)
Family: null
Protein type: null
Protein description: Dihydrofolate reductase

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01567
Location and strand information: 35481 - 36437 (-)
Family: null
Protein type: null
Protein description: Thymidylate synthase

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01568
Location and strand information: 36507 - 37895 (-)
Family: 2.A.3.1.15
Protein type: TC
Protein description: putative transport protein YifK

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01569
Location and strand information: 38026 - 39027 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator LacR

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01570
Location and strand information: 39087 - 42110 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.8749
Protein molecular weight: 116704.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01571
Location and strand information: 42100 - 43992 (-)
Family: 2.A.2.2.1
Protein type: TC
Protein description: Lactose permease

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01573
Location and strand information: 44404 - 45381 (+)
Family: null
Protein type: null
Protein description: Choloylglycine hydrolase

Gene clsuter ID: MGYG000000007_8|CGC1
Gene ID: MGYG000000007_01574
Location and strand information: 45478 - 46056 (+)
Family: 9.B.105.2.2
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000007_01562	Methionine import system permease protein MetP	TC	29512	30213	-	3.A.1.24.6
MGYG000000007_01563	Methionine import ATP-binding protein MetN 2	TC	30206	31264	-	3.A.1.24.3
MGYG000000007_01564	putative D-methionine-binding lipoprotein MetQ	TC	31277	32131	-	3.A.1.24.3
MGYG000000007_01565	putative cation-transporting ATPase E	TC	32480	34882	-	3.A.3.23.2
MGYG000000007_01566	Dihydrofolate reductase	null	34966	35472	-	DHFR_1
MGYG000000007_01567	Thymidylate synthase	null	35481	36437	-	Thymidylat_synt
MGYG000000007_01568	putative transport protein YifK	TC	36507	37895	-	2.A.3.1.15
MGYG000000007_01569	HTH-type transcriptional regulator LacR	TF	38026	39027	-	LacI
MGYG000000007_01570	Beta-galactosidase	CAZyme	39087	42110	-	GH2
MGYG000000007_01571	Lactose permease	TC	42100	43992	-	2.A.2.2.1
MGYG000000007_01573	Choloylglycine hydrolase	null	44404	45381	+	CBAH
MGYG000000007_01574	hypothetical protein	TC	45478	46056	+	9.B.105.2.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature